Protein ZmRcd1L4
ZmRcd1L4 is a protein in the Rcd1-like family.
Information
TF Name: ZmRcd1L4
Species: Maize
TF Family: Rcd1-like
Gene Name(Synonym):
Uniprot ID: B4FEN5
Subgenome: 1

Protein ZmRcd1L4

ZmRcd1L4 is a protein in the Rcd1-like family.

Overview of domains present in v5 transcripts
PF04078
Zm00001eb070960_T004
Zm00001eb070960_T001
Zm00001eb070960_T002
Zm00001eb070960_T003

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d002340DAPseq no logo sequence fimo position
Zm00001d002340DAPseq no logo sequence fimo position
Zm00001d002340ChIPseq no logo sequence fimo position
Zm00001d002340PChIPseq no logo sequence fimo position

Interactions where ZmRcd1L4 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmRcd1L4 is the target  
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There are 30 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb070960_T004 from maize genome v5

Amino Acid Sequence
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MANIPHSFAGASPPSPSPMAGSSSGPAPGQAAKDKKMASAEQLVLELCDPELRENALLELSKKREIFQDLAPLLWHSFGT
IAALLQEIISIYPSLSPPTLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGV
IGALVKVDDTEVISFLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMVVSLAD
QPSTRLLKHIIRCYLRLSDNPRACAALQSCLPDMLKDGTFNNCLRDDPATRRWLQQLLHNVTGGGMGGAPQPGMDPMNMG
M

MANIPHSFAGASPPSPSPMAGSSSGPAPGQAAKDKKMASAEQLVLELCDPELRENALLELSKKREIFQDLAPLLWHSFGT
IAALLQEIISIYPSLSPPTLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGV
IGALVKVDDTEVISFLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMVVSLAD
QPSTRLLKHIIRCYLRLSDNPRACAALQSCLPDMLKDGTFNNCLRDDPATRRWLQQLLHNVTGGGMGGAPQPGMDPMNMG
M

MANIPHSFAGASPPSPSPMAGSSSGPAPGQAAKDKKMASAEQLVLELCDPELRENALLELSKKREIFQDLAPLLWHSFGT
IAALLQEIISIYPSLSPPTLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGV
IGALVKVDDTEVISFLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMVVSLAD
QPSTRLLKHIIRCYLRLSDNPRACAALQSCLPDMLKDGTFNNCLRDDPATRRWLQQLLHNVTGGGMGGAPQPGMDPMNMG
M

MANIPHSFAGASPPSPSPMAGSSSGPAPGQAAKDKKMASAEQLVLELCDPELRENALLELSKKREIFQDLAPLLWHSFGT
IAALLQEIISIYPSLSPPTLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGV
IGALVKVDDTEVISFLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMVVSLAD
QPSTRLLKHIIRCYLRLSDNPRACAALQSCLPDMLKDGTFNNCLRDDPATRRWLQQLLHNVTGGGMGGAPQPGMDPMNMG
M

MANIPHSFAGASPPSPSPMAGSSSGPAPGQAAKDKKMASAEQLVLELCDPELRENALLELSKKREIFQDLAPLLWHSFGT
IAALLQEIISIYPSLSPPTLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGV
IGALVKVDDTEVISFLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMVVSLAD
QPSTRLLKHIIRCYLRLSDNPRACAALQSCLPDMLKDGTFNNCLRDDPATRRWLQQLLHNVTGGGMGGAPQPGMDPMNMG
M

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF04078
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Nucleotide Sequence
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ACAATAGATCTCGTCTCCCTCCGTT...

GRMZM2G045331_T01 from maize genome v3


Related TFome: pUT5782

Amino Acid Sequence
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MANIPHSFAGASPPSPSPMAGSSSGPAPGQAAKDKKMASAEQLVLELCDPELRENALLELSKKREIFQDLAPLLWHSFGT
IAALLQEIISIYPSLSPPTLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGV
IGALVKVDDTEVISFLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMVVSLAD
QPSTRLLKHIIRCYLRLSDNPRACAALQSCLPDMLKDGTFNNCLRDDPATRRWLQQLLHNVTGGGMGGAPQPGMDPMNMG
M

Nucleotide Sequence
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GCTCGATCTCATCCGTCCGCTGGTA...

GRMZM2G045331_T02 from maize genome v3

Amino Acid Sequence
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MAGSSSGPAPGQAAKDKKMASAEQLVLELCDPELRENALLELSKKREIFQDLAPLLWHSFGTIAALLQEIISIYPSLSPP
TLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDTEVISFLLQ
TEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMVVSLADQPSTRLLKHIIRCYLRLS
DNPRACAALQSCLPDMLKDGTFNNCLRDDPATRRWLQQLLHNVTGGGMGGAPQPGMDPMNMGM

Nucleotide Sequence
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GCTCGATCTCATCCGTCCGCTGGTA...

GRMZM2G045331_T03 from maize genome v3

Amino Acid Sequence
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MANIPHSFAGASPPSPSPMAGSSSGPAPGQAAKDKKMASAEQLVLELCDPELRENALLELSKKREIFQDLAPLLWHSFGT
IAALLQEIISIYPSLSPPTLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGV
IGALVKVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMVVSLADQPSTRLLKHIIRCYLRLSDNPRACAALQSCLP
DMLKDGTFNNCLRDDPATRRWLQQLLHNVTGGGMGGAPQPGMDPMNMGM

Nucleotide Sequence
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GCTCGATCTCATCCGTCCGCTGGTA...

GRMZM2G045331_T04 from maize genome v3

Amino Acid Sequence
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MANIPHSFAGASPPSPSPMAGSSSGPAPGQAAKDKKMASAEQLVLELCDPELRENALLELSKKREIFQDLAPLLWHSFGT
IAALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDTEVISFLLQTEIIPLCLRTME
MGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMVVSLADQPSTRLLKHIIRCYLRLSDNPRACAALQSC
LPDMLKDGTFNNCLRDDPATRRWLQQLLHNVTGGGMGGAPQPGMDPMNMGM

Nucleotide Sequence
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CTCCGTTCCCCTCCTGTCCGTCATT...

GRMZM2G045331_T05 from maize genome v3

Amino Acid Sequence
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MANIPHSFAGASPPSPSPMAGSSSGPAPGQAAKDKKMASAEQLVLELCDPELRENALLELSKKREIFQDLAPLLWHSFGT
IAALLQEIISIYPSLSPPTLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGV
IGALVKVDDTEVISFLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMVVSLAD
QPSTRLLKHIIRCYLRLSDNPRACAALQSCLPDMLKDGTFNNCLRDDPATRRWLQQLLHNVTGGGMGGAPQPGMDPMNMG
M

Nucleotide Sequence
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CTCCTGTCCGTCATTTTCTCGTCAC...

GRMZM2G045331_T06 from maize genome v3

Amino Acid Sequence
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MANIPHSFAGASPPSPSPMAGSSSGPAPGQAAKDKKMASAEQLVLELCDPELRENALLELSKKREIFQDLAPLLWHSFGT
IAALLQEIISIYPSLSPPTLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGV
IGALVKVDDTEVISFLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMVVSLAD
QPSTRLLKHIIRCYLRLSDNPRACAALQSCLPDMLKDGTFNNCLRDDPATRRWLQQLLHNVTGGGMGGAPQPGMDPMNMG
M

Nucleotide Sequence
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CTCCTGTCCGTCATTTTCTCGTCAC...

Zm00001d002340_T001 from maize genome v4

Amino Acid Sequence
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MAGSSSGPAPGQAAKDKKMASAEQLVLELCDPELRENALLELSKKREIFQDLAPLLWHSFGTIAALLQEIISIYPSLSPP
TLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDTEVISFLLQ
TEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMVVSLADQPSTRLLKHIIRCYLRLS
DNPRACAALQSCLPDMLKDGTFNNCLRDDPATRRWLQQLLHNVTGGGMGGAPQPGMDPMNMGM

Nucleotide Sequence
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ACAATAGATCTCGTCTCCCTCCGTT...

Zm00001d002340_T002 from maize genome v4

Amino Acid Sequence
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MRILFFLLVIMQVDDTEVISFLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANM
VVSLADQPSTRLLKHIIRCYLRLSDNPRACAALQSCLPDMLKDGTFNNCLRDDPATRRWLQQLLHNVTGGGMGGAPQPGM
DPMNMGM

Nucleotide Sequence
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ACAATAGATCTCGTCTCCCTCCGTT...

Zm00001d002340_T003 from maize genome v4

Amino Acid Sequence
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MANIPHSFAGASPPSPSPMAGSSSGPAPGQAAKDKKMASAEQLVLELCDPELRENALLELSKKREIFQDLAPLLWHSFGT
IAALLQEIISIYPSLSPPTLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGV
IGALVKVDDTEVISFLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMVVSLAD
QPSTRLLKHIIRCYLRLSDNPRACAALQSCLPDMLKDGTFNNCLRDDPATRRWLQQLLHNVTGGGMGGAPQPGMDPMNMG
M

Nucleotide Sequence
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ACAATAGATCTCGTCTCCCTCCGTT...

Zm00001d002340_T004 from maize genome v4

Amino Acid Sequence
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MANIPHSFAGASPPSPSPMAGSSSGPAPGQAAKDKKMASAEQLVLELCDPELRENALLELSKKREIFQDLAPLLWHSFGT
IAALLQEIISIYPSLSPPTLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGV
IGALVKVDDTEVISFLLQTEIIPLCLRTMEMGSELSKT

Nucleotide Sequence
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GTCCGTCATTTTCTCGTCACCTACA...

Zm00001d002340_T005 from maize genome v4

Amino Acid Sequence
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MEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMVVSLADQPSTRLLKHIIRCYLRLSDNPRACAALQ
SCLPDMLKDGTFNNCLRDDPATRRWLQQLLHNVTGGGMGGAPQPGMDPMNMGM

Nucleotide Sequence
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TCCGTCATTTTCTCGTCACCTACAT...

Zm00001d002340_T006 from maize genome v4

Amino Acid Sequence
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MANIPHSFAGASPPSPSPMAGSSSGPAPGQAAKDKKMASAEQLVLELCDPELRENALLELSKVASTAKREIFQDLAPLLW
HSFGTIAALLQEIISIYPSLSPPTLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRL
TSLGVIGALVKVDDTEVISFLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMV
VSLADQPSTRLLKHIIRCYLRLSDNPRACAALQSCLPDMLKDGTFNNCLRDDPATRRWLQQLLHNVTGGGMGGAPQPGMD
PMNMGM

Nucleotide Sequence
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ATGGCAAACATTCCCCACTCCTTCG...

Zm00001eb070960_T001 from maize genome v5

Amino Acid Sequence
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MANIPHSFAGASPPSPSPMAGSSSGPAPGQAAKDKKMASAEQLVLELCDPELRENALLELSKKREIFQDLAPLLWHSFGT
IAALLQEIISIYPSLSPPTLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGV
IGALVKVDDTEVISFLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMVVSLAD
QPSTRLLKHIIRCYLRLSDNPRACAALQSCLPDMLKDGTFNNCLRDDPATRRWLQQLLHNVTGGGMGGAPQPGMDPMNMG
M

Nucleotide Sequence
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GCTCGATCTCATCCGTCCGCTGGTA...

Zm00001eb070960_T002 from maize genome v5

Amino Acid Sequence
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MANIPHSFAGASPPSPSPMAGSSSGPAPGQAAKDKKMASAEQLVLELCDPELRENALLELSKKREIFQDLAPLLWHSFGT
IAALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDTEVISFLLQTEIIPLCLRTME
MGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMVVSLADQPSTRLLKHIIRCYLRLSDNPRACAALQSC
LPDMLKDGTFNNCLRDDPATRRWLQQLLHNVTGGGMGGAPQPGMDPMNMGM

Nucleotide Sequence
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GCTCGATCTCATCCGTCCGCTGGTA...

Zm00001eb070960_T003 from maize genome v5

Amino Acid Sequence
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MAGSSSGPAPGQAAKDKKMASAEQLVLELCDPELRENALLELSKKREIFQDLAPLLWHSFGTIAALLQEIISIYPSLSPP
TLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDTEVISFLLQ
TEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMVVSLADQPSTRLLKHIIRCYLRLS
DNPRACAALQSCLPDMLKDGTFNNCLRDDPATRRWLQQLLHNVTGGGMGGAPQPGMDPMNMGM

Nucleotide Sequence
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ACAATAGATCTCGTCTCCCTCCGTT...


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